2D2D

Crystal Structure Of SARS-CoV Mpro in Complex with an Inhibitor I2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.282
  • R-Value Work: 0.209

Literature

Macromolecules
Sequence Display for 2D2D

Classification: HYDROLASE

Total Structure Weight: 69693.51

Macromolecule Entities
Molecule Chains Length Organism Details
3C-like proteinase A, B 311 Sars-related coronavirus EC#: 3.4.24 IUBMB
Gene Name(s): rep 1a-1b
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ENB
Query on ENB

A, B ETHYL (2E,4S)-4-[((2R)-2-{[N-(TERT-BUTOXYCARBONYL)- L-VALYL]AMINO}-2-PHENYLETHANOYL)AMINO]-5- [(3S)-2-OXOPYRROLIDIN-3-YL]PENT-2-ENOATE
(E)-(S)-4-[(S)-2-((S)-2-TERT-BUTOXYCARBONYLAMINO- 3-METHYL-BUTYRYLAMINO)-2-PHENYL-ACETYLAMINO]- 5-(2-OXO-PYRROLIDIN-3-YL)-PENT-2-ENOIC ACID ETHYL ESTER (Synonym)
C29 H42 N4 O7
NUDVEHBHDBJSMD-XBEUYHOESA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.282
  • R-Value Work: 0.209
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 50.70 α = 90.00
b = 94.74 β = 103.04
c = 66.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-09-08
  • Released Date: 2005-09-20
  • Deposition author(s): Yang, H., Bartlam, M., Xue, X., Yang, K., Liang, W., Ding, Y., Rao, Z.
  • Previous versions: 1WNQ

Revision History

  • 2008-04-30
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance