2D0B

Crystal structure of Bst-RNase HIII in complex with Mg2+

Structural Biology Knowledgebase: 2D0B SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.220

Literature

Macromolecules
Sequence Display for 2D0B

Classification: HYDROLASE

Total Structure Weight: 33897.53

Macromolecule Entities
Molecule Chains Length Organism Details
ribonuclease HIII A 310 Geobacillus stearothermophilus EC#: 3.1.26.4 IUBMB
Gene Name(s): rnhC
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.220
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 67.16 α = 90.00
b = 109.46 β = 90.00
c = 48.41 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-07-31
  • Released Date: 2006-07-18
  • Deposition author(s): Chon, H., Matsumura, H., Koga, Y., Takano, K., Kanaya, S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4