2CGO

FACTOR INHIBITING HIF-1 ALPHA with fumarate

Structural Biology Knowledgebase: 2CGO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.187

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2CGO

Classification: OXIDOREDUCTASE

Total Structure Weight: 40884.86

Macromolecule Entities
Molecule Chains Length Organism Details
HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR A 349 Homo sapiens EC#: 1.14.11.30 IUBMB 1.14.11.n4 IUBMB
Gene Name(s): HIF1AN Gene View FIH1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FUM
Query on FUM

A FUMARIC ACID
C4 H4 O4
VZCYOOQTPOCHFL-OWOJBTEDSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FE
Query on FE

A FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.187
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 86.66 α = 90.00
b = 86.66 β = 90.00
c = 147.35 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-03-09
  • Released Date: 2006-12-13
  • Deposition author(s): Mcdonough, M.A., Clifton, I.J., Schofield, C.J.

Revision History

  • 2012-07-18
    Type: Binding sites and description | Details: REMARK 800,SITE
  • 2012-07-18
    Type: Non-polymer description | Details: HET,HETSYN,FORMUL,REMARK 620,HETNAM
  • 2012-07-18
    Type: Linkage | Details: CONECT,LINK
  • 2012-07-18
    Type: Version format compliance | Details: REMARK 4
  • 2012-07-18
    Type: Other | Details: REMARK 525
  • 2012-07-18
    Type: Atom nomenclature | Details: HETATM
  • 2012-07-18
    Type: Biological assembly | Details: REMARK 350
  • 2012-07-18
    Type: Geometry validation | Details: REMARK 500