2C76

FUNCTIONAL ROLE OF THE AROMATIC CAGE IN HUMAN MONOAMINE OXIDASE B: STRUCTURES AND CATALYTIC PROPERTIES OF TYR435 MUTANT PROTEINS

Structural Biology Knowledgebase: 2C76 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.191

Literature

Macromolecules
Sequence Display for 2C76

Classification: OXIDOREDUCTASE

Total Structure Weight: 119636.34

Macromolecule Entities
Molecule Chains Length Organism Details
AMINE OXIDASE (FLAVIN-CONTAINING) B A, B 520 Homo sapiens EC#: 1.4.3.4 IUBMB
Mutation: Y435W
Gene Name(s): MAOB Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: inferred by homology | Group: MONOTOPIC MEMBRANE PROTEINS

Subgroup Name: Oxidases

Protein Name: Monoamine Oxidase B


Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A, B FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
RSA
Query on RSA

A, B N-PROPARGYL-1(S)-AMINOINDAN
C12 H13 N
RUOKEQAAGRXIBM-LBPRGKRZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
RSA Ki: 127000 nM (99) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.191
  • Space Group: C 2 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 131.24 α = 90.00
b = 223.06 β = 90.00
c = 86.36 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-11-17
  • Released Date: 2006-04-19
  • Deposition author(s): Li, M., Binda, C., Mattevi, A., Edmondson, D.E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4