2BMI

METALLO-BETA-LACTAMASE

Structural Biology Knowledgebase: 2BMI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.196

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2BMI

Classification: HYDROLASE

Total Structure Weight: 51025.10

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (CLASS B BETA-LACTAMASE) A, B 232 Bacteroides fragilis EC#: 3.5.2.6 IUBMB
Details: METALLO-BETA-LACTAMASE, CLASS B BETA-LACTAMASE
Gene Name(s): ccrA cfiA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A, B SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.196
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 47.26 α = 90.00
b = 94.92 β = 90.00
c = 111.42 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-09-17
  • Released Date: 1998-09-23
  • Deposition author(s): Carfi, A., Duee, E., Dideberg, O.
  • Previous versions: 1BMI

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4