2BKU

KAP95P:RANGTP COMPLEX

Structural Biology Knowledgebase: 2BKU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.223

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2BKU

Classification: NUCLEAR TRANSPORT

Total Structure Weight: 231486.61

Macromolecule Entities
Molecule Chains Length Organism Details
GTP-BINDING NUCLEAR PROTEIN RAN A, C 177 Canis lupus EC#: 2.1.1.64 IUBMB
Fragment: RESIDUES 1-177
Gene Name(s): RAN Gene View
IMPORTIN BETA-1 SUBUNIT B, D 861 Saccharomyces cerevisiae Mutation: L254K
Gene Name(s): KAP95 YLR347C L8300.15

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GTP
Query on GTP

A, C GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, C MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.223
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 107.02 α = 90.00
b = 127.88 β = 90.00
c = 161.74 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-02-21
  • Released Date: 2005-05-04
  • Deposition author(s): Lee, S.J., Matsuura, Y., Liu, S.M., Stewart, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4