2BK4

Human Monoamine Oxidase B: I199F mutant in complex with rasagiline

Structural Biology Knowledgebase: 2BK4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.191

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2BK4

Classification: OXIDOREDUCTASE

Total Structure Weight: 119662.42

Macromolecule Entities
Molecule Chains Length Organism Details
AMINE OXIDASE [FLAVIN-CONTAINING] B A, B 520 Homo sapiens EC#: 1.4.3.4 IUBMB
Mutation: I199F
Gene Name(s): MAOB Gene View

Membrane Protein

Source: inferred by homology | Group: MONOTOPIC MEMBRANE PROTEINS

Subgroup Name: Oxidases

Protein Name: Monoamine Oxidase B


Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A, B FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
RAS
Query on RAS

A, B (1R)-N-(prop-2-en-1-yl)-2,3-dihydro-1H-inden- 1-amine
RASAGILINE, BOUND FORM (Synonym)
C12 H15 N
RPAZWTZFMPXUKS-GFCCVEGCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.191
  • Space Group: C 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 132.03 α = 90.00
b = 223.52 β = 90.00
c = 86.71 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-02-10
  • Released Date: 2005-02-14
  • Deposition author(s): Binda, C., Edmondson, D.E., Mattevi, A., Hubalek, F., Khalil, A., Li, M., Castagnoli, N.

Revision History

  • 2012-02-29
    Type: Non-polymer description | Details: FORMUL,HETNAM,HETSYN
  • 2012-02-29
    Type: Other | Details: REMARK 525,REMARK 280
  • 2012-02-29
    Type: Geometry validation | Details: REMARK 500
  • 2012-02-29
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2012-02-29
    Type: Version format compliance | Details: REMARK 4