2BJU

PLASMEPSIN II COMPLEXED WITH A HIGHLY ACTIVE ACHIRAL INHIBITOR

Structural Biology Knowledgebase: 2BJU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.56 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.197

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2BJU

Classification: HYDROLASE

Total Structure Weight: 52728.66

Macromolecule Entities
Molecule Chains Length Organism Details
PLASMEPSIN II A 453 Plasmodium falciparum EC#: 3.4.23.39 IUBMB
Gene Name(s):

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IH4
Query on IH4

A N-(R-CARBOXY-ETHYL)-ALPHA-(S)-(2-PHENYLETHYL)
C37 H44 N4 O3
JJVQUUYZGJWBPW-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
IH4 N/A in BindingDB
IC50: 34 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.56 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.197
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 67.94 α = 90.00
b = 157.14 β = 90.00
c = 38.87 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-02-08
  • Released Date: 2005-04-18
  • Deposition author(s): Prade, L., Jones, A.F., Boss, C., Richards-Bildstein, S., Meyer, S., Binkert, C., Bur, D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4