Macromolecules
Sequence Display for 2AXI

Classification: LIGASE / LIGASE INHIBITOR

Total Structure Weight: 15165.55

Macromolecule Entities
Molecule Chains Length Organism Details
Ubiquitin-protein ligase E3 Mdm2 A 115 Homo sapiens EC#: 6.3.2 IUBMB
Fragment: HDM2
Gene Name(s): MDM2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
cyclic 8-mer peptide B 10 synthetic

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MPO
Query on MPO

A 3[N-MORPHOLINO]PROPANE SULFONIC ACID
C7 H15 N O4 S
DVLFYONBTKHTER-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Observed: 0.149
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 45.18 α = 90.00
b = 77.75 β = 90.00
c = 61.26 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-09-05
  • Released Date: 2006-03-21
  • Deposition author(s): Mittl, P.R.E., Fasan, R., Robinson, J., Gruetter, M.G.

Revision History

  • Version 1_0: 2006-03-21

    Type: Initial release

  • Version 1_1: 2008-05-01

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Atomic model, Database references, Derived calculations, Non-polymer description, Structure summary, Version format compliance

  • Version 1_3: 2012-12-12

    Type: Other

  • Version 1_4: 2017-10-11

    Type: Refinement description