2AFA

Crystal Structure of putative NAG isomerase from Salmonella typhimurium

Structural Biology Knowledgebase: 2AFA SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.207

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2AFA

Classification: ISOMERASE

Total Structure Weight: 296486.38

Macromolecule Entities
Molecule Chains Length Organism Details
NAG isomerase A, B, C..., D, E, FA, B, C, D, E, F 425 Salmonella enterica EC#: 5.3.1.31 IUBMB
Mutation: M48M, M58M, M68M, M84M, M155M, M177M, M258M, M325M, M356M
Gene Name(s): yihS STM4021
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D, E, F L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.207
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 88.93 α = 106.81
b = 91.14 β = 103.52
c = 95.10 γ = 111.79

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-07-25
  • Released Date: 2005-08-16
  • Deposition author(s): Kumaran, D., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4