2AA2

Mineralocorticoid Receptor with Bound Aldosterone


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.214

Literature

Macromolecules
Sequence Display for 2AA2

Classification: TRANSCRIPTION

Total Structure Weight: 32543.58

Macromolecule Entities
Molecule Chains Length Organism Details
Mineralocorticoid receptor A 275 Homo sapiens Mutation: C808S
Gene Name(s): NR3C2 Gene View MCR MLR
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AS4
Query on AS4

A ALDOSTERONE
(11BETA)-11,21-DIHYDROXY-3,20-DIOXOPREGN- 4-EN-18-AL (Synonym)
C21 H28 O5
PQSUYGKTWSAVDQ-ZVIOFETBSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BOG
Query on BOG

A B-OCTYLGLUCOSIDE
C14 H28 O6
HEGSGKPQLMEBJL-RKQHYHRCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
AS4 EC50: 0.18 - 3.8 nM (99) BindingDB
IC50: 9.27 - 43 nM (92 - 99) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.214
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 92.62 α = 90.00
b = 173.14 β = 90.00
c = 42.17 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-07-13
  • Released Date: 2005-07-26
  • Deposition author(s): Bledsoe, R.K., Madauss, K.P., Holt, J.A., Apolito, C.J., Lambert, M.H., Pearce, K.H., Stanley, T.B., Stewart, E.L., Trump, R.P., Willson, T.M., Williams, S.P.

Revision History

  • Version 1_0: 2005-07-26

    Type: Initial release

  • Version 1_1: 2007-10-16

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Non-polymer description, Version format compliance

  • Version 1_3: 2017-10-11

    Type: Refinement description