2Z8Q

ferredoxin from Pyrococcus furiosus, D14C variant

Structural Biology Knowledgebase: 2Z8Q SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.194
  • R-Value Work: 0.164

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2Z8Q

Classification: ELECTRON TRANSPORT

Total Structure Weight: 15665.92

Macromolecule Entities
Molecule Chains Length Organism Details
Ferredoxin A, B 66 Pyrococcus furiosus Mutation: D14C
Gene Name(s): fdxA PF1909

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SF4
Query on SF4

A, B IRON/SULFUR CLUSTER
Fe4 S4
LJBDFODJNLIPKO-VKOJMFJBAC
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NCO
Query on NCO

A, B COBALT HEXAMMINE(III)
Co H18 N6
DYLMFCCYOUSRTK-FGTKAUEHAT
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.194
  • R-Value Work: 0.164
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 51.40 α = 90.00
b = 116.80 β = 90.00
c = 47.70 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-09-07
  • Released Date: 2007-09-18
  • Deposition author(s): Johannessen, M.N., Christensen, H.E.M., Harris, P.

Revision History

  • 2012-05-23
    Type: Atom nomenclature | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4