HIV-1 Reverse Transcriptase in complex with inhibitor GSK952
2YNI
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 117749.65
    Molecule: REVERSE TRANSCRIPTASE/RIBONUCLEASE H
    Polymer: 1 Type: protein Length: 563
    Chains: A
    EC#: 2.7.7.49    2.7.7.7    3.1.26.13   
    Organism: HIV-1 M:B_HXB2R
    Gene Name: gag-pol
    UniProtKB: Protein Feature View | Search PDB | P04585  
    Molecule: P51 RT
    Polymer: 2 Type: protein Length: 447
    Chains: B
    EC#: 2.7.7.49    2.7.7.7    3.1.26.13   
    Fragment: RESIDUES 588-1015
    Organism: HIV-1 M:B_HXB2R
    Gene Name: gag-pol
    UniProtKB: Protein Feature View | Search PDB | P04585  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Hiv-1 m\:b_hxb2r   Taxonomy   Common Name: Human immunodeficiency virus type 1 (hxb2 isolate) Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Hiv-1 m\:b_hxb2r   Taxonomy   Common Name: Human immunodeficiency virus type 1 (hxb2 isolate) Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1A30   HIV-1 PROTEASE COMPLEXED WITH A TRIPEPTIDE INHIBITOR 
    1BV7   COUNTERACTING HIV-1 PROTEASE DRUG RESISTANCE: STRUCTURAL ANALYSIS OF MUTANT PROTEASES COMPLEXED WITH XV638 AND SD146, CYCLIC UREA AMIDES WITH BROAD SPECIFICITIES 
    1BV9   HIV-1 PROTEASE (I84V) COMPLEXED WITH XV638 OF DUPONT PHARMACEUTICALS 
    1BVE   HIV-1 PROTEASE-DMP323 COMPLEX IN SOLUTION, NMR, 28 STRUCTURES 
    1BVG   HIV-1 PROTEASE-DMP323 COMPLEX IN SOLUTION, NMR MINIMIZED AVERAGE STRUCTURE 
    1BWA   HIV-1 PROTEASE (V82F/I84V) DOUBLE MUTANT COMPLEXED WITH XV638 OF DUPONT PHARMACEUTICALS 
    1BWB   HIV-1 PROTEASE (V82F/I84V) DOUBLE MUTANT COMPLEXED WITH SD146 OF DUPONT PHARMACEUTICALS 
    1C0T   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH BM+21.1326 
    1C0U   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH BM+50.0934 
    1C1B   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GCA- 186 
    1C1C   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH TNK- 6123 
    1DMP   STRUCTURE OF HIV-1 PROTEASE COMPLEX 
    1DTQ   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH PETT-1 (PETT131A94) 
    1DTT   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH PETT-2 (PETT130A94) 
    1E6J   CRYSTAL STRUCTURE OF HIV-1 CAPSID PROTEIN (P24) IN COMPLEX WITH FAB13B5 
    1EP4   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH S-1153 
    1ESK   SOLUTION STRUCTURE OF NCP7 FROM HIV-1 
    1EX4   HIV-1 INTEGRASE CATALYTIC CORE AND C-TERMINAL DOMAIN 
    1EXQ   CRYSTAL STRUCTURE OF THE HIV-1 INTEGRASE CATALYTIC COREDOMAIN 
    1FB7   CRYSTAL STRUCTURE OF AN IN VIVO HIV-1 PROTEASE MUTANT INCOMPLEX WITH SAQUINAVIR: INSIGHTS INTO THE MECHANISMS OFDRUG RESISTANCE 
    1FK9   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEXWITH DMP-266(EFAVIRENZ) 
    1FKO   CRYSTAL STRUCTURE OF NNRTI RESISTANT K103N MUTANT HIV- 1REVERSE TRANSCRIPTASE IN COMPLEX WITH DMP-266(EFAVIRENZ ) 
    1FKP   CRYSTAL STRUCTURE OF NNRTI RESISTANT K103N MUTANT HIV- 1REVERSE TRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE 
    1G6L   1.9A CRYSTAL STRUCTURE OF TETHERED HIV-1 PROTEASE 
    1HIV   HIV-1 PROTEASE (HIV-1 PR) COMPLEX WITH U75875 (NOA- HIS-CHA-PSI[CH(OH)CH(OH)]VAL-ILE-APY) 
    1HVH   NONPEPTIDE CYCLIC CYANOGUANIDINES AS HIV PROTEASE INHIBITORS 
    1HVR   HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 (HIV-1) PROTEASE COMPLEXED WITH XK263 OF DUPONT MERCK 
    1HWR   MOLECULAR RECOGNITION OF CYCLIC UREA HIV PROTEASE INHIBITORS 
    1HXB   HIV-1 PROTEINASE COMPLEXED WITH RO 31-8959 
    1JKH   CRYSTAL STRUCTURE OF Y181C MUTANT HIV-1 REVERSETRANSCRIPTASE IN COMPLEX WITH DMP-266(EFAVIRENZ) 
    1JLA   CRYSTAL STRUCTURE OF Y181C MUTANT HIV-1 REVERSETRANSCRIPTASE IN COMPLEX WITH TNK-651 
    1JLB   CRYSTAL STRUCTURE OF Y181C MUTANT HIV-1 REVERSETRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE 
    1JLC   CRYSTAL STRUCTURE OF Y181C MUTANT HIV-1 REVERSETRANSCRIPTASE IN COMPLEX WITH PETT-2 
    1JLE   CRYSTAL STRUCTURE OF Y188C MUTANT HIV-1 REVERSETRANSCRIPTASE 
    1JLF   CRYSTAL STRUCTURE OF Y188C MUTANT HIV-1 REVERSETRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE 
    1JLG   CRYSTAL STRUCTURE OF Y188C MUTANT HIV-1 REVERSETRANSCRIPTASE IN COMPLEX WITH UC-781 
    1JLQ   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEXWITH 739W94 
    1KLM   HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH BHAP U- 90152 
    1LV1   CRYSTAL STRUCTURE ANALYSIS OF THE NON-ACTIVE SITE MUTANT OFTETHERED HIV-1 PROTEASE TO 2.1A RESOLUTION 
    1LW0   CRYSTAL STRUCTURE OF T215Y MUTANT HIV-1 REVERSETRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE 
    1LW2   CRYSTAL STRUCTURE OF T215Y MUTANT HIV-1 REVERSETRANSCRIPTASE IN COMPLEX WITH 1051U91 
    1LWC   CRYSTAL STRUCTURE OF M184V MUTANT HIV-1 REVERSETRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE 
    1LWE   CRYSTAL STRUCTURE OF M41L/T215Y MUTANT HIV-1 REVERSETRANSCRIPTASE (RTMN) IN COMPLEX WITH NEVIRAPINE 
    1LWF   CRYSTAL STRUCTURE OF A MUTANT HIV-1 REVERSE TRANSCRIPTASE(RTMQ+M184V: M41L/D67N/K70R/M184V/T215Y) IN COMPLEX WITHNEVIRAPINE 
    1NCP    
    1O1W   SOLUTION STRUCTURE OF THE RNASE H DOMAIN OF THE HIV -1REVERSE TRANSCRIPTASE IN THE PRESENCE OF MAGNESIUM 
    1ODW   NATIVE HIV-1 PROTEINASE 
    1ODY   HIV-1 PROTEASE COMPLEXED WITH AN INHIBITOR LP-130 
    1QBR   HIV-1 PROTEASE INHIBITORS WIIH LOW NANOMOLAR POTENCY 
    1QBS   HIV-1 PROTEASE INHIBITORS WIIH LOW NANOMOLAR POTENCY 
    1QBT   HIV-1 PROTEASE INHIBITORS WIIH LOW NANOMOLAR POTENCY 
    1QBU   HIV-1 PROTEASE INHIBITORS WIIH LOW NANOMOLAR POTENCY 
    1REV   HIV-1 REVERSE TRANSCRIPTASE 
    1RT1   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH MKC-442 
    1RT2   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH TNK-651 
    1RT3   AZT DRUG RESISTANT HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH 1051U91 
    1RT4   HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH UC781 
    1RT5   HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH UC10 
    1RT6   HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH UC38 
    1RT7   HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH UC84 
    1RTD   STRUCTURE OF A CATALYTIC COMPLEX OF HIV-1 REVERSE TRANSCRIPTASE: IMPLICATIONS FOR NUCLEOSIDE ANALOG DRUG RESISTANCE 
    1RTH    
    1RTI    
    1RTJ    
    1S1T   CRYSTAL STRUCTURE OF L100I MUTANT HIV-1 REVERSETRANSCRIPTASE IN COMPLEX WITH UC-781 
    1S1U   CRYSTAL STRUCTURE OF L100I MUTANT HIV-1 REVERSETRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE 
    1S1V   CRYSTAL STRUCTURE OF L100I MUTANT HIV-1 REVERSETRANSCRIPTASE IN COMPLEX WITH TNK-651 
    1S1W   CRYSTAL STRUCTURE OF V106A MUTANT HIV-1 REVERSETRANSCRIPTASE IN COMPLEX WITH UC-781 
    1S1X   CRYSTAL STRUCTURE OF V108I MUTANT HIV-1 REVERSETRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE 
    1T05   HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO TEMPLATE- PRIMERWITH TENOFOVIR-DIPHOSPHATE BOUND AS THE INCOMINGNUCLEOTIDE SUBSTRATE 
    1TAM   HUMAN IMMUNODEFICIENCY VIRUS, NMR, MINIMIZED AVERAGE STRUCTURE 
    1TKT   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEXWITH GW426318 
    1TKX   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEXWITH GW490745 
    1TKZ   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEXWITH GW429576 
    1TL1   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEXWITH GW451211 
    1TL3   CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEXWITH GW450557 
    1VRT    
    1VRU    
    2WHH   HIV-1 PROTEASE TETHERED DIMER Q-PRODUCT COMPLEX ALONG WITH NUCLEOPHILIC WATER MOLECULE 
    2WOM   CRYSTAL STRUCTURE OF UK-453061 BOUND TO HIV-1 REVERSE TRANSCRIPTASE (K103N). 
    2WON   CRYSTAL STRUCTURE OF UK-453061 BOUND TO HIV-1 REVERSE TRANSCRIPTASE (WILD-TYPE). 
    2YNF   HIV-1 REVERSE TRANSCRIPTASE Y188L MUTANT IN COMPLEX WITH INHIBITOR GSK560 
    2YNG   HIV-1 REVERSE TRANSCRIPTASE MUTANT IN COMPLEX WITH INHIBITOR GSK560 
    2YNH   HIV-1 REVERSE TRANSCRIPTASE MUTANT IN COMPLEX WITH INHIBITOR GSK500 
    3PHV   HIV-1 PROTEASE (ISOLATE HXB2) 
    4B3O   STRUCTURES OF HIV-1 RT AND RNA-DNA COMPLEX REVEAL A UNIQUE RT CONFORMATION AND SUBSTRATE INTERFACE 
    4B3P   STRUCTURES OF HIV-1 RT AND RNA-DNA COMPLEX REVEAL A UNIQUE RT CONFORMATION AND SUBSTRATE INTERFACE 
    4B3Q   STRUCTURES OF HIV-1 RT AND RNA-DNA COMPLEX REVEAL A UNIQUE RT CONFORMATION AND SUBSTRATE INTERFACE 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    CXD
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    CXD C18 H10 Cl3 F N4 O2
    4-chloranyl-N-[[4-chloranyl-3-(3-chloranyl- 5-cyano-phenoxy)-2-fluoranyl-phenyl]methyl]- 1H-imidazole-5-carboxamide
    CXD:2YNI
    MG
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    MG Mg
    MAGNESIUM ION
    TAR
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    TAR C4 H6 O6
    D(-)-TARTARIC ACID
    TAR:2YNI
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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