2WSH

Structure of bacteriophage T4 EndoII E118A mutant


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.200

Literature

Macromolecules
Sequence Display for 2WSH

Classification: HYDROLASE

Total Structure Weight: 67966.59

Macromolecule Entities
Molecule Chains Length Organism Details
ENDONUCLEASE II A, B, C, D 143 Enterobacteria phage t4 sensu lato EC#: 3.1.21 IUBMB
Fragment: RESIDUES 9-144
Mutation: E118A
Gene Name(s): denA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PEG
Query on PEG

B, C DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

A PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.200
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 57.42 α = 90.00
b = 104.97 β = 113.56
c = 57.87 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-09-07
  • Released Date: 2010-03-02
  • Deposition author(s): Andersson, C.E., Lagerback, P., Carlson, K.

Revision History

  • Version 1_0: 2010-03-02

    Type: Initial release

  • Version 1_1: 2011-08-03

    Type: Database references, Derived calculations, Non-polymer description, Other, Refinement description, Source and taxonomy, Structure summary, Version format compliance