2WH6

CRYSTAL STRUCTURE OF ANTI-APOPTOTIC BHRF1 IN COMPLEX WITH THE BIM BH3 DOMAIN

Structural Biology Knowledgebase: 2WH6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.205
  • R-Value Work: 0.198

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2WH6

Classification: APOPTOSIS

Total Structure Weight: 24026.55

Macromolecule Entities
Molecule Chains Length Organism Details
EARLY ANTIGEN PROTEIN R A 173 Human herpesvirus 4 Fragment: BCL-2, RESIDUES 1-160
Gene Name(s): BHRF1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
BCL-2-LIKE PROTEIN 11 B 26 Homo sapiens Fragment: BH3, RESIDUES 51-72
Gene Name(s): BCL2L11 Gene View BIM
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BR
Query on BR

A BROMIDE ION
Br
CPELXLSAUQHCOX-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.205
  • R-Value Work: 0.198
  • Space Group: P 32 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 62.75 α = 90.00
b = 62.75 β = 90.00
c = 92.38 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-05-01
  • Released Date: 2010-05-26
  • Deposition author(s): Kvansakul, M., Huang, D.C.S., Colman, P.M.

Revision History

  • 2011-07-13
    Type: Refinement description | Details: Fixed TLS group
  • 2011-07-13
    Type: Version format compliance | Details: Compliance with PDBx exchange dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor