2RHK

Crystal structure of influenza A NS1A protein in complex with F2F3 fragment of human cellular factor CPSF30, Northeast Structural Genomics Targets OR8C and HR6309A


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.210

Literature

Macromolecules
Sequence Display for 2RHK

Classification: VIRAL PROTEIN / NUCLEAR PROTEIN

Total Structure Weight: 49764.23

Macromolecule Entities
Molecule Chains Length Organism Details
Non-structural protein 1 A, B 140 Influenza a virus Fragment: NS1A effector domain (UNP residues 85-215)
Gene Name(s): NS
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Cleavage and polyadenylation specificity factor subunit 4 C, D 72 Homo sapiens Fragment: F2F3 Zinc-binding domains (UNP residues 61-121)
Mutation: P94S
Gene Name(s): CPSF4 Gene View CPSF30 NAR NEB1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TRS
Query on TRS

D 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER (Synonym)
C4 H12 N O3
LENZDBCJOHFCAS-UHFFFAOYSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

C, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NO3
Query on NO3

A, C NITRATE ION
N O3
NHNBFGGVMKEFGY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.210
  • Space Group: P 41

Unit Cell:

Length (Å) Angle (°)
a = 50.96 α = 90.00
b = 50.96 β = 90.00
c = 205.39 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-10-09
  • Released Date: 2008-07-01
  • Deposition author(s): Das, K., Ma, L.-C., Xiao, R., Radvansky, B., Aramini, J., Zhao, L., Arnold, E., Krug, R.M., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)

Revision History

  • Version 1_0: 2008-07-01

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance