2R8N

Structural Analysis of the Unbound Form of HIV-1 Subtype C Protease


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.178
  • R-Value Work: 0.141

Literature

Macromolecules
Sequence Display for 2R8N

Classification: HYDROLASE

Total Structure Weight: 10935.97

Macromolecule Entities
Molecule Chains Length Organism Details
Pol protein A 99 Human immunodeficiency virus 1 Fragment: HIV-1 protease subtype C, UNP residues 1-99
Mutation: Q7K, L33I, K41R, L63I
Gene Name(s): gag-pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.178
  • R-Value Work: 0.141
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 46.71 α = 90.00
b = 46.71 β = 90.00
c = 100.71 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-09-11
  • Released Date: 2008-07-29
  • Deposition author(s): Coman, R.M., Robbins, A.H., McKenna, R., Dunn, B.M.

Revision History

  • Version 1_0: 2008-07-29

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Non-polymer description, Version format compliance

  • Version 1_2: 2017-10-25

    Type: Refinement description