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Hammerhead Ribozyme G12A mutant after cleavage
 
 
DOI:10.2210/pdb2quw/pdb   NDB ID: UR0122
2QUW
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: RNA
    Structure Weight: 45255.75
     
    Molecule:Hammerhead ribozyme, cleaved fragment
    Polymer:1Type:polyribonucleotideLength:12
    Chains:A, C
    Mutation:G13A
    Other Details:cyclic phosphate at 3'-end, residue CCC
    Molecule:Hammerhead ribozyme, cleaved fragment
    Polymer:2Type:polyribonucleotideLength:57
    Chains:B, D
    Other Details:first residue A13G mutation
     
     
  •  
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    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 2
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
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    Id Details
    2GOZ   
    2QUS   
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    MG     MAGNESIUM ION Mg 3DLigand Explorer Link out to Ligand Expos:MG Link out to SuperLigands:MG Link out to SuperHapten:MG
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    GTP GUANOSINE-5'-TRIPHOSPHATE (parent: G)(type: rnaLinking) C10 H16 N5 O14 P3 Link out to Ligand Expos:GTP Link out to SuperLigands:GTP Link out to SuperHapten:GTP 2D
    CCC CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE (parent: C)(type: rnaLinking) C9 H13 N3 O10 P2 Link out to Ligand Expos:CCC Link out to SuperLigands:CCC Link out to SuperHapten:CCC 2D
     
     
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Biological assembly 1 assigned by authors and generated by PISA (software)
 
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Chi, Y.I.,   Scott, W.G.,   Kim, S.H.

    Deposition:   2007-08-06
    Release:   2008-07-15
    Last Modified (REVDAT):   2009-04-14
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors  [ EDS External Link to EDS ]
    View a histogram of Resolution Resolution[Å]: 2.20
    R-Value: 0.205 (obs.)
    R-Free: 0.262
    Space Group: P 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 28.03 α = 74.24 
    b = 53.14 β = 81.37 
    c = 72.05 γ = 75.65