2QLM

Glycogen phosphorylase in complex with FN67


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.184

Literature

Macromolecules
Sequence Display for 2QLM

Classification: TRANSFERASE

Total Structure Weight: 97859.65

Macromolecule Entities
Molecule Chains Length Organism Details
Glycogen phosphorylase, muscle form A 842 Oryctolagus cuniculus EC#: 2.4.1.1 IUBMB
Gene Name(s): PYGM Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
F68
Query on F68

A N-{[(4-methylphenyl)carbonyl]carbamoyl}-beta- D-glucopyranosylamine
C15 H20 N2 O7
DUVVGYBLYHSFMV-YGEZULPYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
F68 Ki: 2300 nM (100) BindingDB

N/A in BindingMoad
Ki: 2300 nM  PDBbind
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
LLP
Query on LLP
A L-PEPTIDE LINKING C14 H22 N3 O7 P LYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.184
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 128.63 α = 90.00
b = 128.63 β = 90.00
c = 116.54 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-07-13
  • Released Date: 2008-07-15
  • Deposition author(s): Oikonomakos, N.G., Chryina, E.D., Tiraidis, C., Kosmopoulou, M.N., Zographos, S.E., Leonidas, D.D.

Revision History

  • 2011-07-13
    Type: Version format compliance
  • 2017-01-25
    Type: Atomic model