Variant 1 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle
DOI:10.2210/pdb2pxd/pdb   NDB ID: PR0275
Primary Citation
  •   Molecular Description Hide
    Classification: Signaling Protein/rna
    Structure Weight: 29350.21
    Molecule: 4.5 S RNA
    Polymer: 1 Type: rna Length: 49
    Chains: B
    Fragment: DOMAIN IV
    Mutation: C132G, U133G, A175U, G176U
    Molecule: Signal recognition particle protein
    Polymer: 2 Type: protein Length: 102
    Chains: A
    Fragment: C TERMINAL DOMAIN (RESIDUES 328-432)
    Organism: Escherichia coli
    Gene Names: ffh b2610 JW5414
    UniProtKB: Protein Feature View | Search PDB | P0AGD7  
  •   Structure Validation Hide

    View the full validation report  


  • MolProbity Ramachandran Plot

  •   Related Citations in PDB Entry (REMARK 1) Hide
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli  
  •   Related PDB Entries Hide
    Identifier Details
    1DUL   Original structure solved by Batey, et al 
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    NCO Co H18 N6
  •   Modified Residues Hide
    Identifier Formula Parent Type
    MSE C5 H11 N O2 Se MET lPeptideLinking
  •   External Domain Annotations Hide
  •   Structural Biology Knowledgebase Data Hide
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:PR0275
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
Downloadable viewers:
  •   MyPDB Personal Annotations Hide
  •   Deposition Summary Hide
    Authors:   Keel, A.Y.,  Rambo, R.P.,  Batey, R.T.,  Kieft, J.S.

    Deposition:   2007-05-14
    Release:   2007-08-07
    Last Modified (REVDAT):   2013-08-28
  •   Revision History    Hide
    Mouse over text for details
    Atom nomenclature
    Version format compliance
  •   Experimental Details Hide
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.00
    R-Value: 0.251 (work)
    R-Free: 0.283
    Space Group: C 1 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 131.88 α = 90.00 
    b = 77.87 β = 94.04 
    c = 32.43 γ = 90.00