2PVI

PVUII ENDONUCLEASE COMPLEXED TO AN IODINATED COGNATE DNA

Structural Biology Knowledgebase: 2PVI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.76 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.188

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2PVI

Classification: HYDROLASE / DNA

Total Structure Weight: 44629.02


Macromolecule Entities
Molecule Chains Length Organism Details
TYPE II RESTRICTION ENZYME PVUII A, B 157 Proteus vulgaris EC#: 3.1.21.4 IUBMB
Mutation: E55A, Y94A
Gene Name(s): pvuIIR
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*TP*GP*AP*CP*CP*AP*GP*(C38)P*TP*GP*GP*TP*C)-3') C, D 13 synthetic

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
C38
Query on C38
C, D DNA LINKING C9 H13 I N3 O7 P DC

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.76 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.188
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 95.80 α = 90.00
b = 86.30 β = 90.00
c = 48.50 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-11-01
  • Released Date: 1999-12-20
  • Deposition author(s): Horton, J., Cheng, X.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4