2ONE

ASYMMETRIC YEAST ENOLASE DIMER COMPLEXED WITH RESOLVED 2'-PHOSPHOGLYCERATE AND PHOSPHOENOLPYRUVATE

Structural Biology Knowledgebase: 2ONE SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Work: 0.137

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2ONE

Classification: LYASE

Total Structure Weight: 93876.26

Macromolecule Entities
Molecule Chains Length Organism Details
ENOLASE A, B 436 Saccharomyces cerevisiae EC#: 4.2.1.11 IUBMB
Gene Name(s): ENO1 Gene View ENOA HSP48 YGR254W G9160
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
2PG
Query on 2PG

A 2-PHOSPHOGLYCERIC ACID
C3 H7 O7 P
GXIURPTVHJPJLF-UWTATZPHSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PEP
Query on PEP

B PHOSPHOENOLPYRUVATE
C3 H5 O6 P
DTBNBXWJWCWCIK-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
LI
Query on LI

A LITHIUM ION
Li
HBBGRARXTFLTSG-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Observed:
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 63.10 α = 90.00
b = 110.00 β = 113.00
c = 66.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-09-08
  • Released Date: 1998-01-14
  • Deposition author(s): Lebioda, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4