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H98Q mutant of the homing endonuclease I-PPOI complexed with DNA
 
 
DOI:10.2210/pdb2o6m/pdb   NDB ID: PD0950
2O6M
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Hydrolase/dna
    Structure Weight: 48787.41
     
    Molecule:5'-D(*DTP*DTP*DGP*DAP*DCP*DTP*DCP*DTP*DCP*DTP*DTP*DAP*DAP*DGP*DAP*DGP*DAP*DGP*DTP*DCP*DA)-3'
    Polymer:1Type:polydeoxyribonucleotideLength:21
    Chains:C, D
    Other Details:I-PpoI Binding Sequence
    Molecule:Intron-encoded endonuclease I-PpoI
    Polymer:2Type:polypeptide(L)Length:163
    Chains:A, B
    EC#:3.1.-.- Go to IUBMB EC entry  
    Mutation:H98Q
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 2
    Scientific Name: Physarum polycephalum Go to NCBI Taxonomy entry Expression System: Escherichia coli  
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    MG     MAGNESIUM ION Mg 3DLigand Explorer Link out to Ligand Expos:MG Link out to SuperLigands:MG Link out to SuperHapten:MG
    ZN     ZINC ION Zn 3DLigand Explorer Link out to Ligand Expos:ZN Link out to SuperLigands:ZN Link out to SuperHapten:ZN
     
     
  •  
    Move Section Derived Data Hide
     
     
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Eastberg, J.H.,   Stoddard, B.L.

    Deposition:   2006-12-07
    Release:   2007-10-30
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors  [ EDS External Link to EDS ]
    View a histogram of Resolution Resolution[Å]: 2.30
    R-Value: 0.211 (obs.)
    R-Free: 0.244
    Space Group: P 31 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 113.85 α = 90.00 
    b = 113.85 β = 90.00 
    c = 88.88 γ = 120.00