Download MendeleySolution structure and sugar-binding mechanism of mouse Latrophilin-1 RBL: a novel 7TM receptor-attached lectin-like domain.
Vakonakis, I., Langenhan, T., Promel, S., Russ, A., Campbell, I.D.To be published.
2JXA
Mouse Latrophilin-1 GPCR Gal_lectin domain in complex with Rhamnose
- PDB DOI: https://doi.org/10.2210/pdb2JXA/pdb
- BMRB: 15553
- Classification: CELL ADHESION, SIGNALING PROTEIN
- Organism(s): Mus musculus
- Expression System: Komagataella pastoris
- Mutation(s): No
- Deposited: 2007-11-09 Released: 2008-04-29
Experimental Data Snapshot
- Method: SOLUTION NMR
- Conformers Calculated: 50
- Conformers Submitted: 25
- Selection Criteria: structures with the lowest energy
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Latrophilin 1 | 106 | Mus musculus | Mutation(s): 0 Gene Names: Lphn1 |  | |
UniProt | |||||
Find proteins for Q80TR1 (Mus musculus) Explore Q80TR1 Go to UniProtKB: Q80TR1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q80TR1 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAG Query on NAG | B [auth A] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |  | ||
| RAM Query on RAM | C [auth A] | alpha-L-rhamnopyranose C6 H12 O5 SHZGCJCMOBCMKK-HGVZOGFYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: SOLUTION NMR
- Conformers Calculated: 50
- Conformers Submitted: 25
- Selection Criteria: structures with the lowest energy
Entry History
Deposition Data
- Released Date: 2008-04-29 Deposition Author(s): Vakonakis, I., Campbell, I.D.
Revision History (Full details and data files)
- Version 1.0: 2008-04-29
Type: Initial release - Version 1.1: 2011-07-13
Changes: Non-polymer description, Version format compliance - Version 1.2: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Structure summary
