2JAM

Crystal structure of human calmodulin-dependent protein kinase I G

Structural Biology Knowledgebase: 2JAM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.155

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2JAM

Classification: TRANSFERASE

Total Structure Weight: 71757.74

Macromolecule Entities
Molecule Chains Length Organism Details
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE TYPE 1G A, B 304 Homo sapiens EC#: 2.7.11.17 IUBMB
Fragment: CATALYTIC DOMAIN, RESIDUES 18-316
Gene Name(s): CAMK1G Gene View CLICK3 VWS1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
POLYPEPTIDE D 6 Unidentified
POLYPEPTIDE E 4 Unidentified

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
J60
Query on J60

A, B 5-[(E)-(5-CHLORO-2-OXO-1,2-DIHYDRO-3H-INDOL- 3-YLIDENE)METHYL]-N-[2-(DIETHYLAMINO)ETHYL]- 2,4-DIMETHYL-1H-PYRROLE-3-CARBOXAMIDE
C22 H27 Cl N4 O2
XPLJEFSRINKZLC-ATVHPVEESA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.155
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 51.67 α = 65.45
b = 53.74 β = 71.91
c = 64.18 γ = 73.84

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-11-29
  • Released Date: 2007-03-13
  • Deposition author(s): Debreczeni, J.E., Bullock, A., Keates, T., Niesen, F.H., Salah, E., Shrestha, L., Smee, C., Sobott, F., Pike, A.C.W., Bunkoczi, G., von Delft, F., Turnbull, A., Weigelt, J., Arrowsmith, C.H., Edwards, A., Sundstrom, M., Knapp, S.

Revision History

  • 2015-10-21
    Type: Source and taxonomy | Details: SOURCE
  • 2015-10-21
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2015-10-21
    Type: Version format compliance | Details: REMARK 4
  • 2015-10-21
    Type: Non-polymer description | Details: FORMUL
  • 2015-10-21
    Type: Other | Details: REMARK 525