2HXS

Crystal Structure of Rab28A GTPase in the Inactive (GDP-3'P-Bound) Form

Structural Biology Knowledgebase: 2HXS SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.1 Å
  • R-Value Free: 0.184
  • R-Value Work: 0.149

Literature

Macromolecules
Sequence Display for 2HXS

Classification: SIGNALING PROTEIN

Total Structure Weight: 20528.62

Macromolecule Entities
Molecule Chains Length Organism Details
Ras-related protein Rab-28 A 178 Homo sapiens Fragment: Rab28(11-184)
Gene Name(s): RAB28 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
G3D
Query on G3D

A GUANOSINE-3'-MONOPHOSPHATE-5'-DIPHOSPHATE
C10 H16 N5 O14 P3
HEYSFDAMRDTCJM-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.1 Å
  • R-Value Free: 0.184
  • R-Value Work: 0.149
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 30.51 α = 90.00
b = 56.62 β = 90.00
c = 85.11 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-08-03
  • Released Date: 2007-08-07
  • Deposition author(s): Lee, S.H., Li, Y., Dominguez, R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4