2HCV

Crystal structure of L-rhamnose isomerase from Pseudomonas stutzeri with metal ion

Structural Biology Knowledgebase: 2HCV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.192
  • R-Value Work: 0.155

Literature

Macromolecules
Sequence Display for 2HCV

Classification: ISOMERASE METAL-BINDING PROTEIN

Total Structure Weight: 192543.64

Macromolecule Entities
Molecule Chains Length Organism Details
L-rhamnose isomerase A, B, C, D 438 Pseudomonas stutzeri EC#: 5.3.1.14 IUBMB
Mutation: D150N
Gene Name(s): L-RhI
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B, C, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.192
  • R-Value Work: 0.155
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 74.26 α = 90.00
b = 103.97 β = 106.81
c = 107.02 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-06-19
  • Released Date: 2006-12-19
  • Deposition author(s): Yoshida, H., Yamada, M., Takada, G., Izumori, K., Kamitori, S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4