2G37

Structure of Thermus thermophilus L-proline dehydrogenase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.190

Literature

Macromolecules
Sequence Display for 2G37

Classification: OXIDOREDUCTASE

Total Structure Weight: 78135.50

Macromolecule Entities
Molecule Chains Length Organism Details
proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase A, B 327 Thermus thermophilus EC#: 1.5.5.2 IUBMB
Gene Name(s): TT_C1214
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A, B FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MPD
Query on MPD

A, B (4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.190
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 82.07 α = 90.00
b = 89.59 β = 90.00
c = 94.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-02-17
  • Released Date: 2007-02-27
  • Deposition author(s): Tanner, J.J., White, T.A.

Revision History

  • 2008-05-01
    Type: Version format compliance
  • 2011-07-13
    Type: Advisory, Source and taxonomy, Version format compliance