2FMT

METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET

Structural Biology Knowledgebase: 2FMT SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.292
  • R-Value Work: 0.247

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2FMT

Classification: COMPLEX (METHYLTRANSFERASE / TRNA)

Total Structure Weight: 118212.04


Macromolecule Entities
Molecule Chains Length Organism Details
METHIONYL-TRNA FMET FORMYLTRANSFERASE A, B 314 Escherichia coli EC#: 2.1.2.9 IUBMB
Gene Name(s): fmt yhdD b3288 JW3249
Macromolecule Entities
Molecule Chains Length Organism Details
FORMYL-METHIONYL-TRNAFMET2 C, D 77 synthetic

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FME
Query on FME

C, D N-FORMYLMETHIONINE
C6 H11 N O3 S
PYUSHNKNPOHWEZ-YFKPBYRVSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

C, D MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 5 Unique
ID Chains Type Formula 2D Diagram Parent
4SU
Query on 4SU
C, D RNA LINKING C9 H13 N2 O8 P S U
H2U
Query on H2U
C, D RNA LINKING C9 H15 N2 O9 P U
OMC
Query on OMC
C, D RNA LINKING C10 H16 N3 O8 P C
5MU
Query on 5MU
C, D RNA LINKING C10 H15 N2 O9 P U
PSU
Query on PSU
C, D RNA LINKING C9 H13 N2 O9 P U

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.292
  • R-Value Work: 0.247
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 201.71 α = 90.00
b = 68.06 β = 90.00
c = 86.35 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-07-29
  • Released Date: 1999-07-29
  • Deposition author(s): Schmitt, E., Mechulam, Y., Blanquet, S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4