X-ray structure of human CDK6-Vcyclinwith the inhibitor aminopurvalanol
2F2C
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Cell Cycle/transferase
    Structure Weight: 64310.30
    Molecule: Cyclin homolog
    Polymer: 1 Type: protein Length: 254
    Chains: A
    Organism: Herpesvirus saimiri (strain 11)
    Gene Names: 72 ECLF2
    UniProtKB: Protein Feature View | Search PDB | Q01043  
    Molecule: Cell division protein kinase 6
    Polymer: 2 Type: protein Length: 308
    Chains: B
    EC#: 2.7.11.22   
    Fragment: fragment 1-308
    Organism: Homo sapiens
    Gene Names: Gene View for CDK6 CDKN6
    UniProtKB: Protein Feature View | Search PDB | Q00534  
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Herpesvirus saimiri (strain 11)   Taxonomy   Expression System: Spodoptera frugiperda  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
     
  •   Related PDB Entries Hide
    Identifier Details
    2EUF    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    AP9
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    AP9 C19 H26 Cl N7 O
    (2S)-2-({6-[(3-AMINO-5-CHLOROPHENYL)AMINO]- 9-ISOPROPYL-9H-PURIN-2-YL}AMINO)-3-METHYLBUTAN- 1-OL
    AP9:2F2C
    DMS
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    DMS C2 H6 O S
    DIMETHYL SULFOXIDE
    SO4
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    SO4 O4 S
    SULFATE ION
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Schulze-Gahmen, U,  Lu, H.

    Deposition:   2005-11-16
    Release:   2006-06-13
    Last Modified (REVDAT):   2011-07-13
     
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    2011-07-13
    Version format compliance
    2011-07-13
    Flag residual B-value
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.80
    R-Value: 0.241 (obs.)
    R-Free: 0.301
    Space Group: P 65 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 71.52 α = 90.00 
    b = 71.52 β = 90.00 
    c = 449.30 γ = 120.00