2EUV

Principles of protein-DNA recognition revealed in the structural analysis of Ndt80-MSE DNA complexes

Structural Biology Knowledgebase: 2EUV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.94 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.193

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2EUV

Classification: CELL CYCLE / DNA

Total Structure Weight: 48149.59


Macromolecule Entities
Molecule Chains Length Organism Details
NDT80 protein A 345 Saccharomyces cerevisiae Fragment: Ndt80 DNA-binding Domain
Mutation: S146G, I200T
Gene Name(s): NDT80 DAS1 YHR124W
Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*TP*GP*CP*AP*AP*CP*AP*CP*AP*AP*AP*TP*AP*C)-3' B 14 synthetic vG1C MSE DNA strand 1
5'-D(*AP*GP*TP*AP*TP*TP*TP*GP*TP*GP*TP*TP*GP*C)-3' C 14 synthetic vG1C MSE DNA strand 2


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.94 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.193
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 69.23 α = 90.00
b = 79.25 β = 90.00
c = 160.88 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-10-30
  • Released Date: 2006-03-21
  • Deposition author(s): Lamoureux, J.S., Glover, J.N.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4