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INTERACTIONS BETWEEN MORPHOLINYL ANTHRACYCLINES AND DNA: THE CRYSTAL STRUCTURE OF A MORPHOLINO DOXORUBICIN BOUND TO D(CGTACG)
 
 
DOI:10.2210/pdb2des/pdb   NDB ID: DDF041
2DES
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: DNA
    Structure Weight: 4976.03
     
    Molecule:DNA (5'-D(*CP*GP*TP*AP*CP*G)-3')
    Polymer:1Type:polydeoxyribonucleotideLength:6
    Chains:A, B
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    DMM     3'-DESAMINO-3'-(2-METHOXY-4-MORPHOLINYL)- DOXORUBICIN C32 H37 N O13 3DLigand Explorer Link out to Ligand Expos:DMM Link out to SuperLigands:DMM Link out to SuperHapten:DMM
    MG     MAGNESIUM ION Mg 3DLigand Explorer Link out to Ligand Expos:MG Link out to SuperLigands:MG Link out to SuperHapten:MG
    NA     SODIUM ION Na 3DLigand Explorer Link out to Ligand Expos:NA Link out to SuperLigands:NA Link out to SuperHapten:NA
     
     
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  •  
    Move Section Deposition Summary Hide
    Authors:   Cirilli, M.,   Bachechi, F.,   Ughetto, G.,   Colonna, F.P.,   Capobianco, M.L.

    Deposition:   1993-03-16
    Release:   1993-07-15
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors  [ EDS External Link to EDS ]
    View a histogram of Resolution Resolution[Å]: 1.50
    R-Value: 0.192 (obs.)
    R-Free: n/a
    Space Group: P 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 18.01 α = 92.60 
    b = 18.83 β = 100.50 
    c = 26.75 γ = 94.90