2D1L

Structure of F-actin binding domain IMD of MIM (Missing In Metastasis)

Structural Biology Knowledgebase: 2D1L SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.183

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2D1L

Classification: PROTEIN BINDING

Total Structure Weight: 57978.41

Macromolecule Entities
Molecule Chains Length Organism Details
Metastasis suppressor protein 1 A, B 253 Mus musculus Fragment: IMD domain (residues 1-250)
Mutation: M1M, M23M, M64M, M82M, M84M, M112M, N139K, M205M, M216M, M235M
Gene Name(s): Mtss1 Mim
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.183
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 53.50 α = 90.00
b = 37.32 β = 94.07
c = 129.02 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-08-27
  • Released Date: 2006-09-12
  • Deposition author(s): Lee, S.H., Kerff, F., Chereau, D., Ferron, F., Dominguez, R.

Revision History

  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4