2C0Z

The 1.6 A resolution crystal structure of NovW: a 4-keto-6-deoxy sugar epimerase from the novobiocin biosynthetic gene cluster of Streptomyces spheroides


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.195
  • R-Value Work: 0.150

Literature

Macromolecules
Sequence Display for 2C0Z

Classification: ISOMERASE

Total Structure Weight: 23486.46

Macromolecule Entities
Molecule Chains Length Organism Details
NOVW A 216 Streptomyces niveus Gene Name(s): novW
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.195
  • R-Value Work: 0.150
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 59.35 α = 90.00
b = 59.35 β = 90.00
c = 109.03 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-09-09
  • Released Date: 2006-01-25
  • Deposition author(s): Jakimowicz, P., Tello, M., Freel-Meyers, C.L., Walsh, C.T., Buttner, M.J., Field, R.A., Lawson, D.M.

Revision History

  • Version 1_0: 2006-01-25

    Type: Initial release

  • Version 1_1: 2013-12-04

    Type: Derived calculations, Non-polymer description, Other, Source and taxonomy, Version format compliance

  • Version 1_2: 2014-03-12

    Type: Source and taxonomy