2AS5

Structure of the DNA binding domains of NFAT and FOXP2 bound specifically to DNA.

Structural Biology Knowledgebase: 2AS5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.287
  • R-Value Work: 0.238

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2AS5

Classification: Transcription / DNA

Total Structure Weight: 113025.92


Macromolecule Entities
Molecule Chains Length Organism Details
Nuclear factor of activated T-cells, cytoplasmic 2 M, N 287 Homo sapiens Fragment: NFAT1 DNA BINDING DOMAIN
Gene Name(s): NFATC2 Gene View NFAT1 NFATP
Forkhead box protein P2 F, G 93 Homo sapiens Fragment: FOXP2 DNA BINDING DOMAIN
Mutation: D502I
Gene Name(s): FOXP2 Gene View CAGH44 TNRC10
Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(TP*TP*AP*GP*GP*AP*AP*AP*AP*TP*TP*TP*GP*TP*TP*TP*CP*AP*TP*AP*GP*)-3' A, C 21 synthetic
5'-D(AP*AP*CP*TP*AP*TP*GP*AP*AP*AP*CP*AP*AP*AP*TP*TP*TP*TP*CP*CP*TP*)-3' B, D 21 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

F, G MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.287
  • R-Value Work: 0.238
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 65.46 α = 90.00
b = 157.45 β = 118.67
c = 67.67 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-08-22
  • Released Date: 2006-08-08
  • Deposition author(s): Wu, Y., Stroud, J.C., Borde, M., Bates, D.L., Guo, L., Han, A., Rao, A., Chen, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4