2AHX

Crystal structure of ErbB4/HER4 extracellular domain

Structural Biology Knowledgebase: 2AHX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.235

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2AHX

Classification: CELL CYCLE SIGNALING PROTEIN

Total Structure Weight: 141979.24

Macromolecule Entities
Molecule Chains Length Organism Details
Receptor tyrosine-protein kinase erbB-4 A, B 617 Homo sapiens EC#: 2.7.10.1 IUBMB
Fragment: extracellular domain
Mutation: G524D
Gene Name(s): ERBB4 Gene View HER4

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer
 
JSmol
NDG
Query on NDG

A, B 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
C8 H15 N O6
OVRNDRQMDRJTHS-PVFLNQBWSA-N
Ligand Explorer
 
JSmol
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
JSmol
YT3
Query on YT3

B YTTRIUM (III) ION
Y
GRTBAGCGDOYUBE-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.235
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 76.96 α = 90.00
b = 203.09 β = 90.00
c = 261.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-07-28
  • Released Date: 2005-09-27
  • Deposition author(s): Bouyain, S., Longo, P.A., Li, S., Ferguson, K.M., Leahy, D.J.

Revision History

  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4