231D

STRUCTURE OF A DNA-PORPHYRIN COMPLEX

Structural Biology Knowledgebase: 231D SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Observed: 0.219

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 231D

Classification: DNA

Total Structure Weight: 2572.59

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*GP*AP*TP*CP*G)-3') A 6 synthetic

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
PCU
Query on PCU

A CU(II)MESO(4-N-TETRAMETHYLPYRIDYL)PORPHYRIN
C44 H36 Cu N8
VSZLZGDEQJGAOM-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Observed: 0.219
  • Space Group: P 61 2 2

Unit Cell:

Length (Å) Angle (°)
a = 39.49 α = 90.00
b = 39.49 β = 90.00
c = 56.15 γ = 120.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1995-08-25
  • Released Date: 1996-03-22
  • Deposition author(s): Lipscomb, L.A., Zhou, F.X., Presnell, S.R., Woo, R.J., Peek, M.E., Plaskon, R.R., Williams, L.D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4