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BASE-PAIR OPENING AND SPERMINE BINDING-B-DNA FEATURES DISPLAYED IN THE CRYSTAL STRUCTURE OF A GAL OPERON FRAGMENT: IMPLICATIONS FOR PROTEIN-DNA RECOGNITION
DOI:10.2210/pdb206d/pdb   NDB ID: BDF062
206D
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA
    Structure Weight: 4024.14
    Molecule: DNA (5'-D(*CP*GP*GP*TP*GP*G)-3')
    Polymer: 1 Type: dna Length: 6
    Chains: A
    Molecule: DNA (5'-D(*CP*CP*AP*CP*CP*G)-3')
    Polymer: 2 Type: dna Length: 6
    Chains: B
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    SPM
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    SPM C10 H26 N4
    SPERMINE
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: BDF062
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Tari, L.W.,  Secco, A.S.

    Deposition:   1995-04-19
    Release:   1996-06-21
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   2.50
    R-Value: 0.221 (obs.)
    R-Free: n/a
    Space Group: P 61 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 54.45 α = 90.00 
    b = 54.45 β = 90.00 
    c = 42.10 γ = 120.00