1ZNQ

Crsytal Structure of Human Liver GAPDH

Structural Biology Knowledgebase: 1ZNQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.211

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1ZNQ

Classification: OXIDOREDUCTASE

Total Structure Weight: 148180.72

Macromolecule Entities
Molecule Chains Length Organism Details
Glyceraldehyde-3-phosphate dehydrogenase, liver O, P, Q, R 338 Homo sapiens EC#: 1.2.1.12 IUBMB
Gene Name(s): GAPDH Gene View GAPD CDABP0047 OK/SW-cl.12
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAD
Query on NAD

O, P, Q, R NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.211
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 124.50 α = 90.00
b = 132.31 β = 90.00
c = 86.04 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-05-11
  • Released Date: 2005-05-24
  • Deposition author(s): Ismail, S.A., Park, H.W.

Revision History

  • 2014-11-12
    Type: Function and keywords | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4