1Z3N

Human aldose reductase in complex with NADP+ and the inhibitor lidorestat at 1.04 angstrom

Structural Biology Knowledgebase: 1Z3N SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.04 Å
  • R-Value Free: 0.125
  • R-Value Work: 0.091

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1Z3N

Classification: OXIDOREDUCTASE

Total Structure Weight: 37302.71

Macromolecule Entities
Molecule Chains Length Organism Details
aldose reductase A 319 Homo sapiens EC#: 1.1.1.21 IUBMB
Gene Name(s): AKR1B1 Gene View ALDR1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NDP
Query on NDP

A NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
3NA
Query on 3NA

A {3-[(4,5,7-TRIFLUORO-1,3-BENZOTHIAZOL-2-YL)METHYL]- 1H-INDOL-1-YL}ACETIC ACID
5, (Synonym)
C18 H11 F3 N2 O2 S
KYHVTMFADJNSGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
3NA IC50: 5 - 27000 nM (85 - 99) BindingDB

IC50: 5 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.04 Å
  • R-Value Free: 0.125
  • R-Value Work: 0.091
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 50.14 α = 90.00
b = 67.34 β = 92.50
c = 47.88 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-03-14
  • Released Date: 2006-03-14
  • Deposition author(s): Van Zandt, M.C., Jones, M.L., Gunn, D.E., Geraci, L.S., Jones, J.H., Sawicki, D.R., Sredy, J., Jacot, J.L., Dicioccio, A.T., Petrova, T., Mitschler, A., Podjarny, A.D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4