1Z2C

Crystal structure of mDIA1 GBD-FH3 in complex with RhoC-GMPPNP

Structural Biology Knowledgebase: 1Z2C SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.285
  • R-Value Work: 0.211

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1Z2C

Classification: SIGNALING PROTEIN

Total Structure Weight: 133562.39

Macromolecule Entities
Molecule Chains Length Organism Details
Rho-related GTP-binding protein RhoC A, C 193 Homo sapiens Mutation: F25N
Gene Name(s): RHOC Gene View ARH9 ARHC
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Diaphanous protein homolog 1 B, D 383 Mus musculus Gene Name(s): Diaph1 Diap1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GNP
Query on GNP

A, C PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
C10 H17 N6 O13 P3
UQABYHGXWYXDTK-UUOKFMHZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B, C MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.285
  • R-Value Work: 0.211
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 148.64 α = 90.00
b = 85.35 β = 90.00
c = 123.38 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-03-08
  • Released Date: 2005-05-10
  • Deposition author(s): Rose, R., Weyand, M., Lammers, M., Ishizaki, T., Ahmadian, M.R., Wittinghofer, A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4