1YUL

Crystal Structure of Nicotinic Acid Mononucleotide Adenylyltransferase from Pseudomonas aeruginosa

Structural Biology Knowledgebase: 1YUL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.202

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1YUL

Classification: TRANSFERASE

Total Structure Weight: 27454.72

Macromolecule Entities
Molecule Chains Length Organism Details
Probable nicotinate-nucleotide adenylyltransferase A 242 Pseudomonas aeruginosa EC#: 2.7.7.18 IUBMB
Mutation: M20M, M26M, M59M, M104M
Gene Name(s): nadD PA4006

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CIT
Query on CIT

A CITRIC ACID
C6 H8 O7
KRKNYBCHXYNGOX-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.202
  • Space Group: P 43 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 65.53 α = 90.00
b = 65.53 β = 90.00
c = 110.34 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-02-14
  • Released Date: 2005-11-08
  • Deposition author(s): Yoon, H.J., Kim, H.L., Mikami, B., Suh, S.W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4