1YNS

Crystal Structure Of Human Enolase-phosphatase E1 and its complex with a substrate analog

Structural Biology Knowledgebase: 1YNS SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.225

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1YNS

Classification: HYDROLASE

Total Structure Weight: 29228.88

Macromolecule Entities
Molecule Chains Length Organism Details
E-1 enzyme A 261 Homo sapiens EC#: 3.1.3.77 IUBMB
Gene Name(s): ENOPH1 Gene View MASA MSTP145

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HPO
Query on HPO

A 2-OXOHEPTYLPHOSPHONIC ACID
C7 H15 O4 P
ACMQFLCUSWMWKH-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.225
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 54.02 α = 90.00
b = 57.55 β = 90.00
c = 87.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-01-25
  • Released Date: 2005-05-17
  • Deposition author(s): Wang, H., Pang, H., Bartlam, M., Rao, Z.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4