1YG6

ClpP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.221

Literature

Macromolecules
Sequence Display for 1YG6

Classification: HYDROLASE

Total Structure Weight: 303870.53

Macromolecule Entities
Molecule Chains Length Organism Details
ATP-dependent Clp protease proteolytic subunit A, B, C..., D, E, F, G, H, I, J, K, L, M, NA, B, C, D, E, F, G, H, I, J, K, L, M, N 193 Escherichia coli EC#: 3.4.21.92 IUBMB
Gene Name(s): clpP lopP b0437 JW0427
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MPD
Query on MPD

A, B, C, D, E, F, G, H, I, J, K, L, M, N (4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.221
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 192.50 α = 90.00
b = 103.30 β = 98.40
c = 159.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-01-04
  • Released Date: 2006-04-04
  • Deposition author(s): Bewley, M.C., Graziano, V., Griffin, K., Flanagan, J.M.

Revision History

  • Version 1_0: 2006-04-04

    Type: Initial release

  • Version 1_1: 2008-04-30

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance