1Y0D

T-to-THigh Quaternary Transitions in Human Hemoglobin: desArg141alpha deoxy low-salt

Structural Biology Knowledgebase: 1Y0D SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.175

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1Y0D

Classification: transport protein

Total Structure Weight: 64233.39

Macromolecule Entities
Molecule Chains Length Organism Details
Hemoglobin alpha chain A, C 140 Homo sapiens Fragment: Residues 1-140
Gene Name(s): HBA1 Gene View HBA2 Gene View
Hemoglobin beta chain B, D 146 Homo sapiens Gene Name(s): HBB Gene View

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A, B, C, D PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.175
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 96.90 α = 90.00
b = 99.00 β = 90.00
c = 65.90 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-11-15
  • Released Date: 2004-11-30
  • Deposition author(s): Kavanaugh, J.S., Rogers, P.H., Arnone, A.
  • Previous versions: 1DSH

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4