1XRV

Crystal Structure of the novel secretory signalling protein from Porcine (SPP-40) at 2.1A resolution.

Structural Biology Knowledgebase: 1XRV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.188

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1XRV

Classification: SIGNALING PROTEIN

Total Structure Weight: 41126.76

Macromolecule Entities
Molecule Chains Length Organism Details
signal processing protein A 361 Sus scrofa Gene Name(s): CHI3L1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.188
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 62.59 α = 90.00
b = 66.55 β = 90.00
c = 107.47 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-10-16
  • Released Date: 2004-11-02
  • Deposition author(s): Srivastava, D.B., Ethayathulla, A.S., Singh, N., Sharma, S., Singh, T.P.

Revision History

  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4