1UR3

Crystal structure of the apo form of the E.coli ydhF protein


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.57 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.200

Literature

Macromolecules
Sequence Display for 1UR3

Classification: OXIDOREDUCTASE

Total Structure Weight: 36673.57

Macromolecule Entities
Molecule Chains Length Organism Details
HYPOTHETICAL OXIDOREDUCTASE YDHF M 319 Escherichia coli EC#: 1 IUBMB
Gene Name(s): ydhF b1647 JW1639
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

M SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
M L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.57 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.200
  • Space Group: P 63

Unit Cell:

Length (Å) Angle (°)
a = 87.72 α = 90.00
b = 87.72 β = 90.00
c = 66.17 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-10-24
  • Released Date: 2003-12-04
  • Deposition author(s): Jeudy, S., Claverie, J.M., Abergel, C.

Revision History

  • Version 1_0: 2003-12-04

    Type: Initial release

  • Version 1_1: 2011-05-08

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance