1UMP

GEOMETRY OF TRITERPENE CONVERSION TO PENTACARBOCYCLIC HOPENE

Structural Biology Knowledgebase: 1UMP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.13 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.186

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1UMP

Classification: ISOMERASE

Total Structure Weight: 217725.63

Macromolecule Entities
Molecule Chains Length Organism Details
SQUALENE--HOPENE CYCLASE A, B, C 631 Alicyclobacillus acidocaldarius EC#: 4.2.1.129 IUBMB 5.4.99.17 IUBMB
Gene Name(s): shc Aaci_2443

Membrane Protein

Source: inferred by homology | Group: MONOTOPIC MEMBRANE PROTEINS

Subgroup Name: Squalene-Hopene Cyclases

Protein Name: Squalene-hopene cyclase


Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SQA
Query on SQA

A, B, C 2-AZASQUALENE
N,,8E (Synonym)
C29 H51 N
OBYAAZRQFIVRJS-GUUMBNHASA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
C8E
Query on C8E

A, B, C (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
C16 H34 O5
FEOZZFHAVXYAMB-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.13 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.186
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 139.14 α = 90.00
b = 139.14 β = 90.00
c = 240.70 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-08-27
  • Released Date: 2004-02-03
  • Deposition author(s): Reinert, D.J., Balliano, G., Schulz, G.E.

Revision History

  • 2013-11-20
    Type: Source and taxonomy | Details: SOURCE
  • 2013-11-20
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2013-11-20
    Type: Geometry validation | Details: REMARK 500
  • 2013-11-20
    Type: Binding sites and description | Details: SITE
  • 2013-11-20
    Type: Non-polymer description | Details: FORMUL
  • 2013-11-20
    Type: Other | Details: REMARK 525
  • 2013-11-20
    Type: Version format compliance | Details: REMARK 4