1TO6

Glycerate kinase from Neisseria meningitidis (serogroup A)

Structural Biology Knowledgebase: 1TO6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.283
  • R-Value Work: 0.226

Literature

Macromolecules
Sequence Display for 1TO6

Classification: TRANSFERASE

Total Structure Weight: 79707.34

Macromolecule Entities
Molecule Chains Length Organism Details
Glycerate kinase A, B 371 Neisseria meningitidis EC#: 2.7.1.31 IUBMB
Gene Name(s): glxK NMA1473
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.283
  • R-Value Work: 0.226
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 105.77 α = 90.00
b = 77.39 β = 107.41
c = 101.44 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-06-13
  • Released Date: 2004-06-22
  • Deposition author(s): Rajashankar, K.R., Kniewel, R., Solorzano, V., Lima, C.D., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4