1T5W

HLA-DR1 in complex with a synthetic peptide (AAYSDQATPLLLSPR)

Structural Biology Knowledgebase: 1T5W SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.231

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1T5W

Classification: IMMUNE SYSTEM

Total Structure Weight: 89313.00

Macromolecule Entities
Molecule Chains Length Organism Details
HLA class II histocompatibility antigen, DR alpha chain A, D 180 Homo sapiens Fragment: Extracellular domain
Gene Name(s): HLA-DRA Gene View HLA-DRA1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
HLA class II histocompatibility antigen, DRB1-1 beta chain B, E 190 Homo sapiens Fragment: Extracellular domain
Gene Name(s): HLA-DRB1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
15-mer peptide fragment of Regulatory protein MIG1 C, F 15 Saccharomyces cerevisiae Fragment: Synthetic peptide
Gene Name(s): MIG1 CAT4 SSN1 YGL035C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.231
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 96.55 α = 90.00
b = 112.65 β = 90.00
c = 206.98 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-05-05
  • Released Date: 2004-08-17
  • Deposition author(s): Zavala-Ruiz, Z., Strug, I., Anderson, M.W., Gorski, J., Stern, L.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4